Publications by Grantees

The following list of publications describe research carried out with CIRM funding. Click on the publication title for a brief summary of the research and for more information about the CIRM grants that contributed to the research.

Title Year Journal
The Drosophila MI-2 chromatin-remodeling factor regulates higher-order chromatin structure and cohesin dynamics in vivo. 2012 PLoS Genet
The effect of stromal cell-derived factor-1alpha/heparin coating of biodegradable vascular grafts on the recruitment of both endothelial and smooth muscle progenitor cells for accelerated regeneration. 2012 Biomaterials
The emerging functions of the p53-miRNA network in stem cell biology. 2012 Cell Cycle
The expanding world of stem cell modeling of Huntington’s disease: creating tools with a promising future. 2012 Genome Med
The functions of microRNAs in pluripotency and reprogramming. 2012 Nat Cell Biol
The gene expression profiles of induced pluripotent stem cells from individuals with childhood cerebral adrenoleukodystrophy are consistent with proposed mechanisms of pathogenesis. 2012 Stem Cell Res Ther
The genomic stability of induced pluripotent stem cells. 2012 Protein Cell
The GLIB technique for genome-wide mapping of 5-hydroxymethylcytosine. 2012 Nat Protoc
The immunology of neurodegeneration. 2012 J Clin Invest
The LIM protein Ajuba restricts the second heart field progenitor pool by regulating Isl1 activity. 2012 Dev Cell
The little molecules that could: a story about microRNAs in neural stem cells and neurogenesis. 2012 Front Neurosci
The many roads to Rome: induction of neural precursor cells from fibroblasts. 2012 Curr Opin Genet Dev
The metabolome of induced pluripotent stem cells reveals metabolic changes occurring in somatic cell reprogramming. 2012 Cell Res
The RB family is required for the self-renewal and survival of human embryonic stem cells. 2012 Nat Commun
The retinoblastoma tumor suppressor and stem cell biology. 2012 Genes Dev
The road to purified hematopoietic stem cell transplants is paved with antibodies. 2012 Curr Opin Immunol
The role of stem cells and progenitors in the genesis of medulloblastoma. 2012 Exp Neurol
The roles of the reprogramming factors Oct4, Sox2 and Klf4 in resetting the somatic cell epigenome during induced pluripotent stem cell generation. 2012 Genome Biol
The SDF-1alpha/CXCR4 axis is required for proliferation and maturation of human fetal pancreatic endocrine progenitor cells. 2012 PLoS One
The secondary heart field is a new site of calcineurin/Nfatc1 signaling for semilunar valve development. 2012 J Mol Cell Cardiol
The tunica adventitia of human arteries and veins as a source of mesenchymal stem cells. 2012 Stem Cells Dev
Three differentiation states risk-stratify bladder cancer into distinct subtypes. 2012 Proc Natl Acad Sci U S A
Tissue engineering of the intestine in a murine model. 2012 J Vis Exp
Tissue-engineering of the gastrointestinal tract. 2012 Curr Opin Pediatr
Topological domains in mammalian genomes identified by analysis of chromatin interactions. 2012 Nature
TPP1 OB-Fold Domain Controls Telomere Maintenance by Recruiting Telomerase to Chromosome Ends. 2012 Cell
Transcriptional Analysis of Pluripotency Reveals the Hippo Pathway as a Barrier to Reprogramming. 2012 Hum Mol Genet
Transcriptional regulation by coactivators in embryonic stem cells. 2012 Trends Cell Biol
Transcriptional regulation of TRKC by SOX2 in human embryonic stem cells. 2012 Stem Cell Res
Trophoblasts Regulate the Placental Hematopoietic Niche through PDGF-B Signaling. 2012 Dev Cell
Ubiquitin-dependent regulation of COPII coat size and function. 2012 Nature
Uncovering the role of genomic “dark matter” in human disease. 2012 J Clin Invest
Use of human perivascular stem cells for bone regeneration. 2012 J Vis Exp
Use of LysoTracker to detect programmed cell death in embryos and differentiating embryonic stem cells. 2012 J Vis Exp
Use of whole embryo culture for studying heart development. 2012 Methods Mol Biol
Using flow cytometry to compare the dynamics of photoreceptor outer segment phagocytosis in iPS derived RPE cells. 2012 Invest Ophthalmol Vis Sci
Using the BLT Humanized Mouse as a Stem Cell based Gene Therapy Tumor Model. 2012 J Vis Exp
Utf1: Goldilocks for ESC Bivalency. 2012 Cell Stem Cell
VEGF/neuropilin-2 regulation of Bmi-1 and consequent repression of IGF-IR define a novel mechanism of aggressive prostate cancer. 2012 Cancer Discov
Whole-genome microRNA screening identifies let-7 and mir-18 as regulators of germ layer formation during early embryogenesis. 2012 Genes Dev
Widespread dynamic DNA methylation in response to biotic stress. 2012 Proc Natl Acad Sci U S A
Wnt Inhibition Correlates with Human Embryonic Stem Cell Cardiomyogenesis: A Structure-Activity Relationship Study Based on Inhibitors for the Wnt Response. 2012 J Med Chem
Wnt proteins. 2012 Cold Spring Harb Perspect Biol
Wnt Signaling and Injury Repair. 2012 Cold Spring Harb Perspect Biol
Wnt signaling promotes Muller cell proliferation and survival after injury. 2012 Invest Ophthalmol Vis Sci
Wnt signaling: the beta-cat(enin)’s meow. 2012 Genes Dev
X-space MPI: magnetic nanoparticles for safe medical imaging. 2012 Adv Mater
Zebrafish screen identifies novel compound with selective toxicity against leukemia. 2012 Blood
3D-Spheroid Culture of Human Gingiva-Derived Mesenchymal Stem Cells Enhances Mitigation of Chemotherapy-Induced Oral Mucositis. 2011 Stem Cells Dev
A bioinformatic assay for pluripotency in human cells. 2011 Nat Methods